Armavica/rebop
Fast stochastic simulator for chemical reaction networks
Hi! I am a physicist by training with a PhD in computational biology. I love Rust, Monte-Carlo methods and scientific computing. Core developer of @pymc-devs.
Repositories
Armavica/vim-polyglot
A solid language pack for Vim.
Armavica/maturin
Build and publish crates with pyo3, cffi and uniffi bindings as well as rust binaries as python packages
Armavica/telomeres
Simulation of cell populations and lineages during replicative senescence. Code associated with "Mathematical model linking telomeres to senescence in Saccharomyces cerevisiae reveals cell lineage versus population dynamics"; used for simulation, parameter estimation and graphical representation.
Armavica/xarray-for-bio
Armavica/bambi
BAyesian Model-Building Interface (Bambi) in Python.
Armavica/assignment
Assignments and Graders for Discrete Optimization on Coursera
Armavica/arviz
Exploratory analysis of Bayesian models with Python
Armavica/argmin-core
argmin optimizaton toolbox core
Armavica/argmin
A pure Rust optimization library (WIP)
Armavica/aoc2021
Advent of Code 2021
Armavica/aicsimageio
Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python
Armavica/aesara
Aesara is a Python library for defining, optimizing, and efficiently evaluating mathematical expressions involving multi-dimensional arrays.
Armavica/academics-on-mastodon
A list of various lists consisting of academics on Mastodon
Armavica/99-Problems-Rust
The 99 Lisp problems (soon) solved in Rust [Work in Progress]
Armavica/pymc-sphinx-theme
A thin sphinx theme to customize pydata-sphinx-theme consistently cross PyMC websites.
Armavica/datatree
WIP implementation of a tree-like hierarchical data structure for xarray.
Armavica/xarray
N-D labeled arrays and datasets in Python
Armavica/pymc-experimental
Armavica/staged-sg-filter
Armavica/pymc-resources
PyMC educational resources
Armavica/starship
☄🌌️ The minimal, blazing-fast, and infinitely customizable prompt for any shell!
Armavica/bioio
Image reading, metadata management, and image writing for Microscopy images in Python
Armavica/particles
Sequential Monte Carlo in python
Armavica/catala-website
Source code for the website of the Catala language
Armavica/indentfreepython
Python liberated of the tyranny of indentation
Armavica/rustlex
Lexical analysers generator for Rust, written in Rust
Armavica/pymc-examples
Examples of PyMC models, including a library of Jupyter notebooks.
Armavica/pytensor
PyTensor is a fork of Aesara -- a Python library for defining, optimizing, and efficiently evaluating mathematical expressions involving multi-dimensional arrays.
Armavica/pymc.io
PyMC project website and blog!