Name: Geoffrey Thomson
Type: User
Company: Yale University
Bio: I'm a Postdoc in molecular plant biology with an interest in bioinformatics, computational biology and data science.
Blog: g-thomson.com
I am a Postdoctoral Associate in the Jacob Lab at Yale University. I am interested in understanding the molecular underpinnings of 🌱 development and how they can be manipulated for beneficial ends. My current work involves developing new tools for 🌱 genome engineering, mainly in Arabidopsis thaliana but I also think about Citrus species.
I am also interested in reproducible research practices, R programming and data science.
Check out https://g-thomson.com/ for more info
bigdatar_docker
Docker image of R packages to work with Big Data
bsgenome.mtruncatula
BSgenome data package for Medicago truncatula
crisprcitrus
Website for the CRISPR Citrus Project
dajin
One-step genotyping software using a long-read sequencer
dajin_gt
dajin_nanosim_gt
dplyr
Dplyr: A grammar of data manipulation
easyd3r
An R wrapper for https://github.com/UoA-eResearch/easy-d3
efficientr
Efficient R programming: a book
efficientr_docker
Unofficial Docker image for Efficient R programming by Colin Gillespie and Robin Lovelace
g-thomson
g-thomson.blog
Pinning thoughts down
ggmsa
:traffic_light: Visualizing publication-quality multiple sequence alignment using ggplot2
ggpubr
'ggplot2' Based Publication Ready Plots
googler
googler: Google from the R Console
gpys
Geoffrey's Python Scripts
gt_travel_blog
Travel blog for my parents
gthomsonnotes.online
My notes and links, basically stuff I see on twitter
gthor
R package of things I find useful in my PhD work
intermediater
Data for Geoffrey Thomson's Intermediate R course
manu
This package provides colour palettes derived from birds native to New Zealand
nimbioseq
Nim Library for sequence (protein/nucleotide) bioinformatics
nlr-annotator_docker
Unofficial Docker image for NLR-Annotator
personal_website
An online CV
plyranges_docker
Unofficial docker image for plyranges
sgrna_design_docker
Docker image for designing sgRNAs
txdb.mtruncatula
TxDB data package for Medicago truncatula
upsetr
An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
