KevinSayers/sayerskt
Site
AWS Professional Services consultant supporting bioinformatics and HPC.
Repositories
KevinSayers/MastersThesis
My master's thesis and defense presentation.
KevinSayers/SRAGPU-nf
A Nextflow workflow that utilizes GPU enabled Singularity containers to process scRNA-seq data
KevinSayers/terraform-provider-aws-parallelcluster
AWS ParallelCluster Provider for Terraform
KevinSayers/amazon-omics-tools
KevinSayers/amazon-omics-tutorials
KevinSayers/cwl_flows
Some common workflow language flows.
KevinSayers/agc-custom-images
KevinSayers/amazon-genomics-cli
KevinSayers/AWS_POC_Snakemake
KevinSayers/AWS_MVP_HPC
Details about the MVP effort for testing AWS as HPC for a simple RNAseq pipeline.
KevinSayers/rnaseq-nf
A proof of concept of RNAseq pipeline
KevinSayers/adventure_films
KevinSayers/jekyll-now
Build a Jekyll blog in minutes, without touching the command line.
KevinSayers/multitest
KevinSayers/website
Nextflow public web site
KevinSayers/ucx-py_notes
Installation notes for UCX and UCX-PY
KevinSayers/HPC
A collection of various resources, examples, and executables for the general NREL HPC user community's benefit.
KevinSayers/Dask_MPI_xgboost
KevinSayers/nextflow-website
WORK IN PROGRESS - Nextflow website Hugo based
KevinSayers/tmpdsl2
KevinSayers/awesome-pipeline
A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin
KevinSayers/Singularity-Tutorial
Materials for 3 hour hands-on workshop entitled "Creating and running software containers with Singularity"
KevinSayers/nfwes
KevinSayers/master_of_pores
Nextflow pipeline for analysis of Nanopore reads (from RNA/cDNA/DNA)
KevinSayers/nf-tower
Nextflow Tower platform
KevinSayers/cwl-tes
cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.
KevinSayers/B2SAFE-B2STAGE-Training
This training module provides you with instructions on how to deploy B2SAFE and B2STAGE. It also shows you how to use these services. Moreover, the module provides hands-on training on Persistent Identifiers, more specifically Handle v8 and the corresponding B2HANDLE python library.