Puriney/color_collection
Collection of colors in daily life
“人活着是为了创造，不是为了胜负” | Be creative, not competitive.
Repositories
Puriney/Public_TME_genes
Puriney/lib-vanderbilt-tnbctype
Gene signatures for the TNBC subtypes
Puriney/MEDALT
Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile
Puriney/keyboard-pcb-guide
Guide on how to design keyboard PCBs with KiCad
Puriney/cicero-release
Puriney/MrY
Management of References for Yourself
Puriney/CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
Puriney/CNVWorkshop
Workshop for CNV analysis with Bioconductor
Puriney/copykit
Toolkit for single-cell copy number analysis
Puriney/schex
Puriney/knnsmoother
R (Rcpp) implementation for the K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data
Puriney/survminer
Survival Analysis and Visualization
Puriney/scCancer
A package for automated processing of single cell RNA-seq data in cancer
Puriney/scATAC-pro
A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data
Puriney/scProportionTest
Puriney/prepare_demuxlet_snp
Prepare the reference SNP profile required by Demuxlet
Puriney/popscle
A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and auxilary tools
Puriney/signac
R toolkit for the analysis of single-cell chromatin data
Puriney/scater
Clone of the Bioconductor repository for the scater package, see https://bioconductor.org/packages/devel/bioc/html/scater.html for the official development version.
Puriney/seurat
R toolkit for single cell genomics
Puriney/randomcoloR
An R package for generating attractive and distinctive colors.
Puriney/scanorama
Panoramic stitching of single cell data
Puriney/seurat-wrappers
Community-provided extensions to Seurat
Puriney/ChIPseeker
ChIP peak Annotation, Comparison and Visualization
Puriney/celseq2
Generate the UMI count matrix from CEL-Seq2 sequencing data
Puriney/SpatialCPie
Puriney/cra
Cumulative Recovery Analysis
Puriney/velocyto.R
RNA velocity estimation in R
Puriney/LV_METRIC
Matlab Implementation for LV Myocardial Effusion Threshold Reduction with Intravoxel Computation (LV-METRIC) developed by Yi Wang's lab at Cornell MRI Research lab.