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Name: Aarthi Venkat
Type: User
Bio: Computational Genomics
Location: Yale University
Name: Aarthi Venkat
Type: User
Bio: Computational Genomics
Location: Yale University
Archetypal Analysis network (AAnet)
Final Project: Machine Learning Applications in Genomics
BEELINE: evaluation of algorithms for gene regulatory network inference
Advanced Bioinformatics Lab is a class at UCSD with a focus on bioinformatics experimental design. I have completed six weeks of projects and designed my own experiment to examine differential gene expression with respect to chloroquine resistance in Plasmodium falciparum for the final project.
CADD scripts release for offline scoring. For more information about CADD, please visit our website
Simulating single-cell data using gene regulatory networks 📠
Leveraging genes known to be associated with gene of interest for target gene expression
Simple script that helps in transforming interactions from the STRING DB so that they have Official Gene Symbols (using the mapping files on the string-db website).
Molecular Sequencing Analysis is a class at UCSD teaching algorithmic design in bioinformatics with DNA string input. The class covers sequence/motif alignment, assembly de Brujin graphs, and clustering algorithms, among other topics.
Recommender Systems and Web Mining is a machine learning class designed to teach and test Python implementation of recommender systems, data mining, and predictive analytics. For my final project, I was required to identify and write a predictive task with a large dataset (>50,000 datapoints). As such, I wrote a multi-class text classification script to classify PubMed abstracts by GO term
A collection of scripts and tools for loading, processing, and handling single cell data.
Introduction to Biomedical Data Science and Health Informatics summer course
Assessing Differential Sentiment across Counties through Crisis Progression
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.