adigenova's Projects
personal website
Nextflow pipeline to discover ecDNA on cancer genomes
Advance programming for Bioengineering PhD
Not my work, just a repo for DiscovarDenovo version 51885
Fast-SG: An alignment-free algorithm for ultrafast scaffolding graph construction from short or long reads.
FAST-SG idea implemented using minimizer and chaining with the minimap2 API.
A repository demonstrating genome assembly using Google colab
Ultra-fast detection and split of miss-assembled contigs using pair-end reads.
Synthetic Scaffolding Graph construction, Overlaps, Scaffolding, Validation, Gap filling and Polishing
Repo to hold some code for the multiomic training at IARC
Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads
Toolkit for processing sequences in FASTA/Q formats
Curso Introductorio de Python para alumnos de Tercero y cuarto Medio
Programs implementing the trio-binning genome assembly method
Repository for database course UOH
Curso Procesamiento Masivo de Datos (PMD) UOH 2022
An accurate and ultra-fast hybrid genome assembler
This repository contains a test dataset and the instructions to run Wengan (version 0.1).