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awesome-biomolecule-language-cross-modeling

Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through Multi-Modal Learning: A Survey"

awesome-self-driving-labs

A curated list of self-driving laboratories that combine hardware automation and artificial intelligence to accelerate scientific discovery.

awesome-single-cell

List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

biofiletypes

File types and their extensions for biology

chtc-website-source

Source markdown and contents of the CHTC website

compbio-edi

Curated summary of efforts to promote equity, diversity, and inclusion in computational biology PhD programs and societies.

covid-19_sinai_reviews

covid19-review

A collaborative review of the emerging literature on diagnostics and treatments related to COVID-19

datasci-at-r1-institutions

A (mostly) complete list of data science efforts at R1 institutions

datasciquotes

Data Science related quotes

deep-review

A collaboratively written review paper on deep learning, genomics, and precision medicine

deep-rules

Ten Simple Rules for Deep Learning in Biology

deepchem

Deep-learning models for Drug Discovery and Quantum Chemistry

demo-manuscript

A demo Manubot manuscript

dmol-book

Deep learning for molecules and materials book

docker-introduction

Introduction to Docker and reproducible computational environments.

docker-matlab-runtime

dragonn

Deep Neural Networks Tutorial for Regulatory Genomics

drug-class

comparing drug classification methods

dtsdatamodel

The data model for Drosophila Time Series experiments

firstpaper

folding_tools

A collection of *fold* tools

git-novice

Software Carpentry introduction to Git for novices.

hpc-python

HPC Python lesson materials

htcondor

Snakemake profile for HTCondor

informers

baseline IBR methods and metrics evals for all IBRs (including non-baselines)

integration-review

keras

Deep Learning library for Python. Convnets, recurrent neural networks, and more. Runs on Theano and TensorFlow.

learn-bioinformatics

List of resources for learning bioinformatics, from beginner to advanced

lightchem

Light-weight Machine Learning Framework for Drug Discovery