aksimhal Goto Github PK

abide-brainhack19

ABIDE BrainHack 2019

aksimhal.github.io

personal website

astrocytes-synapses-fxs

Code associated with "Multifaceted Changes in Synaptic Composition and Astrocytic Involvement in a Mouse Model of Fragile X Syndrome"

bctpy

brain connectivity toolbox for python

crisis-afar-analysis

Code associated with "CRISIS AFAR: an international collaborative study of the impact of the COVID-19 pandemic on mental health and service access in youth with autism and neurodevelopmental conditions"

curvature-asd-analysis

Code associated with 'Measuring robustness of brain networks in autism spectrum disorder with ricci curvature'

ggnn-2023

Code associated with "Geometric graph neural networks on multi-omics data to predict cancer survival outcomes"

mm-orc-subtypes

Code associated with "Gene interaction network analysis in multiple myeloma detects complex immune dysregulation associated with shorter survival"

mri-simulator-analysis

Code associated with "Predicting multiscan MRI outcomes in children with neurodevelopmental conditions following MRI simulator training"

neuroparc

orc-act-analysis

Code associated with "Changes in the geometry and robustness of diffusion tensor imaging networks: Secondary analysis from a randomized controlled trial of young autistic children receiving an umbilical cord blood infusion"

orc-omics

Code associated with "ORC-Omics (ORCO): Ollivier-Ricci curvature for unsupervised omic network analysis"

posters

Collection of posters I've presented

probabilistic-synapse-detection

Code associated with "Probabilistic fluorescence-based synapse detection"

resistorcolorcodecalc

Resistor Color Band Calculator

ricenooksensors

RNS

rorb-analysis

RORB Data Analysis

segmented-dendrites

.stl files of segmented dendrites

sunflower

MATLAB Code to track sunflower growth

synapse-detection-examples

Synapse detection examples in both Python and MATLAB

synapseanalysis

Code associated with "A Computational Synaptic Antibody Characterization Tool for Array Tomography"

ucsf-notebooks

Notebooks explaining synapse detection

website_v1

anish's website

windows8_app_samples

Windows 8 XAML/C# App Samples