Comments (11)
Closed by #167 as soon as tests pass!
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I actually pulled out an old laptop and can run the current main
branch successfully 😂 thank god for not updating old laptops LOL
I am going to investigate the current versions and see if I can identify which version of something caused the break
from algebraicpetri.jl.
Also just tested in this setup and that equality is holding true even in the environment I have where it works. I will try to identify what version of Symbolics/Catalyst/Julia breaks this
from algebraicpetri.jl.
Yeah it looks like there was a breaking change in a dependency. I was looking into this earlier today actually. Looks like the error is coming from Symbolics.jl which is an indirect dependency
from algebraicpetri.jl.
Thank god for "semantic versioning" allowing us to update freely without hitting breaking changes...
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Also for reference, here is a force re-run of the tests a few hours ago if anyone wants to look at the logs:
https://github.com/AlgebraicJulia/AlgebraicPetri.jl/actions/runs/6656621641
from algebraicpetri.jl.
julia> import OrdinaryDiffEq, ModelingToolkit
julia> OrdinaryDiffEq.ODEProblem === ModelingToolkit.ODEProblem
true
Is this equality a recent change? It would explain why the extensions are stomping on each other.
from algebraicpetri.jl.
Looks like updating all dependencies except pinning Symbolics to 5.5.0 it works. Updating just Symbolics to 5.10.0 introduces the issue. Currently bisecting the problematic version, but it's taking some time... dang precompilation
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Oh man, I just realized I misread the original issue here and am talking about a different issue...
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Sorry for the noise here! I marked my previous comments all off topic
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It looks like this severely stalls the precompilation of SimulationService.jl. I get a fun mix of warnings and errors. Happy to share the terminal output if it will help.
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Related Issues (20)
- Remove SubACSets from AlgebraicPetri
- `mca_help` within `mca` in SubACSets.jl doesn't recurse.
- It appears MCA recursion can StackOverflow
- `mca` not searching in order of size HOT 2
- `one_removed_subobs` does not remove arcs from Petri net
- Have `mca` find the morphisms and return the spans HOT 1
- Generalize `mca` to work for more than two input ACSets HOT 1
- `vectorfield_expr` only works with LabelledArrays HOT 6
- Utilize PrecompileTools.jl for Caching HOT 1
- Use cascading delete provided by Catlab HOT 1
- `prim_petri` of TypedPetri.jl not labeling types of states correctly
- AlgebraicPetri v0.9
- Issues when running stratified model HOT 1
- oapply_typed results in wrong wiring HOT 2
- Gatlab Migration HOT 4
- Core Files in docs build HOT 3
- suggestions for documentation improvement HOT 1
- Use color to distinguish morphisms of Petri nets HOT 2
- Update Comparison tests to Catlab > v0.16.9 HOT 1
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