Name: Ambu Vijayan
Type: User
Company: ICAR - Central Tuber Crops Research Institute
Bio: Passion for Bioinformatics, Biotechnology, Molecular biology, Computational Biology and Statistics
Location: India
Blog: https://ambuvijayan.medium.com/
Ambu Vijayan's Projects
A software provides statistical analysis and data visualization specifically tailored for Agricultural Research
Basic Sequence Processing Tool for Biological Data is a set of functions used in bioinformatics to analyze DNA or RNA sequences, perform tasks such as cleaning sequences, counting nucleotides, calculating GC content, generating reverse complements, and translating sequences to protein to just name a few.
bioarchlinux build status site
Bioconductor data science introduction
Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
Codes for Medium Articles
The Leek group guide to data sharing
Lecture notes/book in progress on computing for conservation genomics
Plotting Assignment 1 for Exploratory Data Analysis
Suppose you have a large research article or thesis in word document format which may have hundreds of pages. As part of editing, you want to check if there are duplicate paragraphs and then highlight to make them outstanding, so that you can deal with the duplicate sentences.
Fixing Data Made Easy for Statistical Analysis
Shape file of India : Country and State
Workshop
Jupyter Notebook to Mark latitude and Longitude on Spacial Maps
Jupyter Notebook to Retrieve Longitude and Latitude of a huge number of places
Update and extension of Avril Coglan's Little Book of R for Bioinformatics
Aim to be the bioinformatics repository with more and newer packages
For those who are looking for a working parse_metrics.sh file in the manual for Variant Calling Pipeline using GATK4 at https://gencore.bio.nyu.edu/variant-calling-pipeline-gatk4/
Practical_Machine_Learning
Repository for Programming Assignment 2 for R Programming on Coursera
R Markdown Document for Spacial Data Analysis with Product and a Rating value
Peer Assessment 1 for Reproducible Research