ANJALI P. PATNI's Projects
2019 single cell RNA sequencing Workshop @ UCD AND UCSF
Course on Advanced R Programming (Johns Hopkins University)
Config files for my GitHub profile.
APPSR: automated preprocessing pipeline for meta-analysis of small RNA sequencing data.
RNAseq analysis without replicate
A library of free open source icons for science illustrations in biology and chemistry
Material of the book "Omic association studies with R/Bioconductor"
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
CORNAS is a fast method for reliable DEG calls in unreplicated conditions.
Supplementary script for meta-analysis primer
Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)
Fundamentals of R Programming and Statistical Analysis [video], published by Packt
Data intensive science for everyone.
Galaxy RNA workbench
The Open Source Data Science Masters
recipes that save time
litsearchr is an R package to partially automate search term selection for systematic reviews using keyword co-occurrence networks. In addition to identifying search terms, it can write Boolean searches and translate them into over 50 languages.
:exclamation: This is a read-only mirror of the CRAN R package repository. metagear â Comprehensive Research Synthesis Tools for Systematic Reviews and Meta-Analysis. Homepage: http://lajeunesse.myweb.usf.edu https://github.com/mjlajeunesse
DE analysis module for Week3
By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline
A Fiji macro for measuring organoid area and size
R package for analyzing and interactively exploring large-scale single-cell RNA-seq datasets
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
PowerShell for every system!
Repository for Programming Assignment 2 for R Programming on Coursera
Gathering metadata about publications, patents, grants, clinical trials and policy documents from PubMed database
PyDock Tutorial