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bioc_docker

Docker containers for Bioconductor

bookdown-demo

A minimal book example using bookdown

caffo-coursera

A repository of my Coursera latex code and notes

causal-inference-rstats

cbm-journalclub

cboettig-labnotebook

Source code and version history for my online lab notebook

content_based_childrens_book_recommender

NLP Project - The objective here is to build a recommendation system for children’s picture books, that takes into account parent interests as well as children’s interests. I implemented NMF Topic Modelling and a Cosine Similarity powered Recommendation Engine on the publically available GoodReads Dataset.

coursera-data-analysis

My notes etc. for following along with Jeff Leek's Coursera course on Data Analysis.

coursera-dl

A script for downloading course material (video's, pdfs, quizzes, etc) from coursera.org

courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

dataanalysis

The lecture slides for Coursera's Data Analysis class

datascientist

datascientist

dawn

Data Analysis Workflow Navigation

docker_fastqc

FastQC v0.11.8

get-started-quarto

rstudio::conf-2022 Workshop on Quarto

ggplot2-graphic-design

github-wikifier

A pre-commit Git Hook that will generate all the Table of Contents you will ever need. Just write your content, and let it take over.

hbcabc

Compilation of rmarkdown templates for bioinformatics analysis

heatmap

humanliver

R Data: Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations

imop_github

Also IMOP to be accessed as a public webpage

ir_black-osx

A black OS X Terminal theme that is actually readable (by Todd Werth) (Files for Mac OS 10.7+)

jk-vita

A simple LaTeX academic CV template

knitr_reports

knitr_reports

labnotebook3

Lab Notebook

mios-wemo

Plugin for MiOS home automation gateways to communicate with Belkin WeMo sensors and switches

mkrentowicz.com

My mom's web portfolio showcasing her ceramic art works.

multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

nozzle

Nozzle is a report generation toolkit for data analysis pipelines implemented in R.

ob-project-template

Outlier Bio analysis project template