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Abdurrahman Abul-Basher's Projects

atot icon atot

Analyzing topics and authors in chat logs for crime investigation.

awesome-single-cell icon awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

cleanlab icon cleanlab

The standard data-centric AI package for data quality and machine learning with messy, real-world data and labels.

data-science-ipython-notebooks icon data-science-ipython-notebooks

Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.

dreamgaussian icon dreamgaussian

Generative Gaussian Splatting for Efficient 3D Content Creation

edward icon edward

A library for probabilistic modeling, inference, and criticism. Deep generative models, variational inference. Runs on TensorFlow.

humann icon humann

HUMAnN 3.0 is the next generation of HUMAnN 1.0 (HMP Unified Metabolic Analysis Network).

mimic-code icon mimic-code

MIMIC Code Repository: Code shared by the research community for the MIMIC-III database

mintia icon mintia

Metagenomic INsertT BIoinformatic Annotation

nmslib icon nmslib

Non-Metric Space Library (NMSLIB): An efficient similarity search library and a toolkit for evaluation of k-NN methods for generic non-metric spaces.

pgmpy icon pgmpy

Python Library for Probabilistic Graphical Models

pycirclize icon pycirclize

Circular visualization in Python (Circos Plot, Chord Diagram)

pydgn icon pydgn

A research library for Deep Graph Networks

pyod icon pyod

A Python Toolbox for Scalable Outlier Detection (Anomaly Detection)

pyprobml icon pyprobml

Python code for "Probabilistic Machine learning" book by Kevin Murphy

pyxclib icon pyxclib

Tools for multi-label classification problems.

scarches icon scarches

Reference mapping for single-cell genomics

scikit-feature icon scikit-feature

open-source feature selection repository in python (DMML Lab@ASU)

single-cell-tutorial icon single-cell-tutorial

Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

transformers icon transformers

🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

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