bbarad Goto Github PK

atom-pymol-language

Pymol Language for Atom Text Editor

bbarad

Readme

bbarad.github.io

Personal Webpage

biorxiv_analytics

A project for doing analytics scraped from biorxiv - learning web scraping.

bootcamp-programming

The in-class programming project for QBC Bootcamp

bootcamp_worksheet

cistem_dev_env

A Docker container for cisTEM development

coffee

I love roasting, brewing, and drinking coffee.

deconoising

defects_dlmbl

Team Defects project for DL@MBL project

denoiseg

Joint training of denoising and segmentation.

diffusion-net

Pytorch implementation of DiffusionNet for fast and robust learning on 3D surfaces like meshes or point clouds.

dna_python

A quick project to teach python to aspiring scientists in an hour or two.

docker

My docker files

etsegtools

Operations on Quantized or Binary CryoET Segmentations

have_your_cake

Using neural networks to reduce the tradeoffs in tomographic data collections

hdn

This repository hosts the code for HDN (associated with the paper https://arxiv.org/pdf/2104.01374.pdf) for pixel and structured noise removal for microscopy and natural image datasets

lamella_mapper

Map tomograms back to their lamella position

learning_julia

A repository to version the work that I do while I learn Julia.

lisc_algorithm

live2d

Live On The Fly 2D Classification with cisTEM and Warp

mac_setup

A series of instructions and scripts to set up a brand new mac to have all my desired settings.

matplotlibrc

Settings file for matplotlib to maximize figure niceness.

membrain-seg

membrane segmentation in 3D for cryo-ET

micromanipulation_analysis

mthompson-lab.github.io

Thompson Lab Website

nyt_science_speller

Spelling Bee twitter bot for words used often by scientists.

package_control_channel

Default channel file for Package Control. Follow the directions at:

paintera

photos-of-me

Download your tagged photos from Facebook