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Benika's Projects

bayesiannetwork icon bayesiannetwork

Bayesian belief network implementation, and an Markov chain Monte Carlo technique that uses Gibbs sampling to do inference.

bn-inference icon bn-inference

A set of utilities to perform exact probabilistic inference in Bayesian Networks (C)

bn_mcmc icon bn_mcmc

Markov Chain Monte Carlo methods implemented for Bayesian Networks in C++

bnn-hep icon bnn-hep

Bayesian neural networks for high energy physics. The project is an adaptation of FBM package by R.M. Neal

chmm icon chmm

CUDA implementation of hidden Markov model training and classification

deepnn icon deepnn

An efficient Deep Neural Network implementation

dpbayesiannet icon dpbayesiannet

Cross platform C liblary of the Bayesian network including learning algorithm which was optimized by dynamic programming of Silander and Myllymaki(2006).

eeg_svm_lvq_classifiers icon eeg_svm_lvq_classifiers

This project holds some MATLAB files that can be used for learning more about Neural Networks and Support Vector Machines. These were used to train and classify some EEG data. A real time ADC connected to a signal conditioning circuit was connected via an arduino to MATLAB and there is a GUI here that can be used to train the system for say a square/sine/triangle and then given an unknown waveform it would try and place to which class this waveform belongs to.

fgs icon fgs

FragGeneScan -- hidden Markov model for predicting prokaryotic coding regions

flashpca icon flashpca

Fast Principal Component Analysis of Large-Scale Genome-Wide Data

fsom icon fsom

A tiny C library for managing SOM (Self-Organizing Maps) neural networks

gam302-assessment-03 icon gam302-assessment-03

A simulator examining emergent behaviour in a realistic galactic trade simulation, employing fuzzy logic, genetic algorithms and Bayesian networks.

hadoopbnem icon hadoopbnem

Bayesian Network (BN) parameter learning using Expectation Maximization (EM) on Hadoop! And Age-Layered EM (ALEM) too.

hmm icon hmm

hidden markov model on GPU

hmmc_clustering icon hmmc_clustering

Project for clustering cancer patients based on hidden markov models.

htk icon htk

Hidden Markov Model Toolkit (fork)

htk_3_4_1 icon htk_3_4_1

The Hidden Markov Model Toolkit (HTK) from University of Cambridge.

kmeans icon kmeans

A CUDA implementation of the k-means clustering algorithm

kmeans-1 icon kmeans-1

Serial and Parallel Implementations of K-means clustering algorithm

kpca-eigen icon kpca-eigen

Kernel principal component analysis using the Eigen linear algebra library [machine learning]

libnnal icon libnnal

Multi-layer perceptron neural network implementation written in C language

montecarlomethod icon montecarlomethod

Finds a value very close to the minimum of a mathematical function using a Monte Carlo method to generate random samples and pthreads to divide up the work.

neuralnet icon neuralnet

Simple and compact neural network in C using backpropagation algorithm

nip icon nip

Dynamic Bayesian Network library

pca icon pca

Simple program for principal component analysis

snprelate icon snprelate

Parallel computing toolset for relatedness and principal component analysis of SNP data

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