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ypriverol avatar ypriverol commented on August 15, 2024 1

Hi @foellmelanie :

Here some ideas.

Hi all,

thanks for your efforts to generate better metadata annotations :)

In the Experiment Design description I am missing an explanation on how to handle unfractionated data. Comment [Fraction Identifier] is included in the templates, therefore I assume one should not delete the column. So far I have decided to enter "1" for every dataset that has no fractions. Would it be more clear to write "not applicable"?

The best practices should be put 1 and this is what we are encouraging. You took the right way. I will add that to the documentation.

Maybe you can add one sentence to clarify this in section "3. From Samples to Assay (MSRun)".

Best,
Melanie

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ypriverol avatar ypriverol commented on August 15, 2024

@foellmelanie can you review this PR: #143 it contains the documentation about the fractions.

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foellmelanie avatar foellmelanie commented on August 15, 2024

@ypriverol looks good

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