bioinfo-chru-strasbourg Goto Github PK
Type: User
bioinfo-chru-strasbourg's Projects
annovar
ANNOVAR
bashtop
bashtop
bcftools
BCFTOOLS
cap
CAP (Clipping Amplicon Primer) clips amplicon primers by identifying the most probable amplicon for each reads
edith
EDITH dashboard monitoring STARK analyses
fatbam
FATBAM
hgvs
HGVS variant name parsing and generation
howard
HOWARD annotates (using ANNOVAR and snpEff) and prioritizes (rules to Flag and Score) genetic variations, calculates and normalizes annotations, translates and export VCF format (into VCF or TSV) and generates variants statistics (bcftools and snpEff)
loki
loki is a validation tool for stark infrastructure
outlyzer
OutLyzer
ped_raw
stark
STARK is a Next-Generation Sequencing data analysis pipeline for clinical diagnosis
stark-modules
STARK Modules & Services
varank
A simple and powerful tool designed for variant ranking from next generation sequencing data
vcf2circos
python plotly Circos from VCF
vision
VISION - VCF Viewer and Prioritization [JARVIS module]
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