Comments (1)
AlanWu886
commented on August 11, 2024
Feature Description
It may benefit many users to be able to set compression parameters for both zarr and tiff writing.
Use Case
See AllenCellModeling/aicsimageio#553
Solution
Add compression args to writer classes. I guess these can be specific to the supported compression types of the underlying libraries. Consider just forwarding kwargs through.
Thanks a lot for including the enhancement!!
Alan
from bioio.
Related Issues (20)
- Features / Bugs / Eva Notes HOT 6
- Anaconda Distribution HOT 1
- Add units to PhysicalPixelSizes
- Surface more information during reader/plugin selection HOT 5
- Improve error message on UnsupportedFileFormatError HOT 5
- can't instantiate BioImage in v1.0 HOT 3
- Unable to open czi line-scan kymographs - missing raw frame(t) pixel data HOT 1
- reader chunk_dims are too coarse-grained for dask
- read physical time metadata HOT 1
- bioio-tifffile and bioio-ome-tiff parse ome-tiff metadata differently HOT 2
- Add ArrayLikeReader
- HTTP URL for ZARR fails to be validated by `determine_plugin` for bioio-ome-zarr HOT 6
- Clarify that the equivalent of aicsimageio.types.PhysicalPixelSizes is bioio_base.types.PhysicalPixelSizes
- Add new ome-zarr-writer
- Centralized guess dim order HOT 1
- Admin: update pre-commit to `ruff` HOT 1
- remove zarr<2.18.0 constraint
- bioio-tifffile takes precedence over bioio-ome-tiff for ome-tiffs HOT 1
- Plugin Reader Metadata Does Not Standardize Supported Suffixes HOT 3
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from bioio.