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Name: faraz
Type: User
Company: Cornell University
Bio: Bioinformatics Programmer III
Location: Ithaca, NY
Blog: www.fahmed.info
Name: faraz
Type: User
Company: Cornell University
Bio: Bioinformatics Programmer III
Location: Ithaca, NY
Blog: www.fahmed.info
GitHub Actions for the R community
nextflow ATACseq pipeline for GG02
ATAC-seq peak-calling, QC and differential analysis pipeline.
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
MECFS B samples merged (Final October)
A versatile and lightning fast package for processing 10X, inDrop and Drop-seq data.
DEMUX, ALIGN, DESEQ2 DGE CALLS
miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.
:microscope: Path to a free self-taught education in Bioinformatics!
bedford lab research
Collection of Programming, Databases, Linux & Tools Books
🤓 Build your own (insert technology here)
RNA-seq workflow for UALBANY CFG - Demux, QC, Vis, Align, preProcess, DGE Calls
CGAT - Computational Genomics Analysis Tools
Search for a set of compatible indexes for your sequencing experiment
A preprocessing pipeline for ChIP-seq, including alignment, quality control, and visualization.
C4693 C7338 C8651rpt C9020
A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries
CLIP Tool Kit (CTK)
A shiny application to perform differential gene expression analysis of count data using DESeq2. The app also allows unsupervised exploration of data using PCA and hierarchical clustering.
R packge for deseq2shiny app
DESeq2Shiny2 is an R shiny application to handle NGS count data and perform unsupervised clustering and Differential Gene Expression Analysis using DESeq2.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.