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active-inference-tutorial-scripts

Supplementary scripts for Step-by-step active inference modelling tutorial

anesthesiaprojectemergence

bmilinkovic.github.io

cpplearning

deeplearning

dit

Python package for information theory.

einet

Uncertainty and causal emergence in complex networks

emergepy

flzc

Fast Lempel-Ziv complexity library in C, with MATLAB interface

get_sleep_data

Get the EEG sleep data from OSF "Nap EEG"

gpmat

Gnuplot API for MATLAB

gvmat

MATLAB interface for some GraphViz functionality

idtxl

jidt

JIDT: Java Information Dynamics Toolkit for studying information-theoretic measures of computation in complex systems

kalman-and-bayesian-filters-in-python

Kalman Filter book using Ipython Notebook. Focuses on building intuition and experience, not formal proofs. Includes Kalman filters,extended Kalman filters, unscented Kalman filters, particle filters, and more. All exercises include solutions.

lzc-personality-project

mvgc1

The MVGC Multivariate Granger Causality toolbox for Granger-causal inference from time-series data.

mvgc2

The MVGC Multivariate Granger Causality toolbox (Version 2) for Granger-causal inference from time-series data. CURRENTLY IN EARLY DEVELOPMENT - UNTESTED!

phitoolbox

pyphi

A toolbox for integrated information theory.

reconcilingemergences

Measures of causal emergence from multivariate time series data.

sippy

Systems Identification Package for PYthon

spectralexponent

this code allows to compute the spectral exponent of the resting EEG, based on the Power Spectral Density, over a given scaling region.

ssdi-1

Implement Dynamical Independence computation for linear state-space systems

tvb-root

Main TVB codebase

tvbemergence