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Name: Brian Eads

Type: User

Company: Bayer Crop Science

Bio: At Bayer my technical work is in data science, analytics engineering, high-performance and cloud computing, computational biology, and application development.

Location: St Louis MO

About Me

  • šŸ‘‹ Hi, Iā€™m @BrianEads. I'm currently doing cloud engineering for small molecules R&D for Bayer Crop Science. My background is in data science, genomics and analytics engineering.

Professional Background

  • šŸ‘€ Iā€™m interested in data, machine learning and automation. My team deploys a wide array of tools in this space designed to accelerate discovery of novel small molecules, and to augment human decisions with new analytics pipelines to speed time to market.
  • I have a background in molecular biology and biochemistry, extensive experience in genomics and bioinformatics, and an abiding interest in using machine learning for computational biology domains. Much of our data engineering work straddles on-prem and cloud assets as we move further into new patterns of GCP-stored data (accessed via BigQuery or API). Our cloud expertise is heavily AWS and we use GitHub (natch) and other enterprise-supported platforms across the DevOps lifecycle of our products.

Problem Domains

  • šŸŒ± My team is currently leveraging serverless patterns for our workloads, and exploring emerging patterns like deep learning and transfer learning. In machine learning spaces, we help our modeler colleagues to automate model deployment and monitoring.

Side Projects

  • šŸ’žļø I enjoy several tech-related hobbies, including archaeogenomics and Rasp-pi hacking.

Contact

Brian Eads's Projects

awesome-deepbio icon awesome-deepbio

A curated list of awesome deep learning applications in the field of computational biology

bayerclaw icon bayerclaw

BayerCLAW workflow orchestration system for AWS

compositperterbanalysis icon compositperterbanalysis

The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell level. CPA performs OOD predictions of unseen combinations of drugs, learns interpretable embeddings, estimates dose-response curves, and provides uncertainty estimates.

deep-learning-drizzle icon deep-learning-drizzle

Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures!!

gt4sd-core icon gt4sd-core

GT4SD, an open-source library to accelerate hypothesis generation in the scientific discovery process.

hnmt icon hnmt

Helsinki Neural Machine Translation system

interpret icon interpret

Fit interpretable models. Explain blackbox machine learning.

isoreader icon isoreader

Read IRMS (Isotope Ratio Mass Spectrometry) data files into R

meshcnn icon meshcnn

Convolutional Neural Network for 3D meshes in PyTorch

moby icon moby

Moby Project - a collaborative project for the container ecosystem to assemble container-based systems

tensor2robot icon tensor2robot

Distributed machine learning infrastructure for large-scale robotics research

tensorflow2-generative-models icon tensorflow2-generative-models

Implementations of a number of generative models in Tensorflow 2. GAN, VAE, Seq2Seq, VAEGAN, GAIA, Spectrogram Inversion. Everything is self contained in a jupyter notebook for easy export to colab.

tensorwatch icon tensorwatch

Debugging, monitoring and visualization for Python Machine Learning and Data Science

tybalt icon tybalt

Training and evaluating a variational autoencoder for pan-cancer gene expression data

vdcnn icon vdcnn

Implementation of Very Deep Convolutional Neural Network for Text Classification

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