brsynth Goto Github PK
Name: BioRetroSynth
Type: Organization
Bio: Our group is interested in synthetic biology and systems metabolic engineering in whole-cell and cell-free systems.
Location: France
Blog: http://www.jfaulon.com
BioRetroSynth's Projects
pysbol3
Native python implementation of SBOL 3.0 specification
retropath2-wrapper
Python wrapper for Retropath2.0 Knime workflow
retropath2_wrapper-feedstock
A conda-smithy repository for retropath2_wrapper.
retropathrl
Reinforcement Learning based bioretrosynthesis tool
rp2biosensor
Build Sensing-Enabling Metabolic Pathways from RetroPath2.0 output
rp2biosensor-feedstock
A conda-smithy repository for rp2biosensor.
rp2paths
RetroPath2.0 to pathways
rp3_dcache
rpbasicdesign
Convert rpSBML file to SBOL + CSV files ready to be used by DNA-Bot.
rpbasicdesign-feedstock
A conda-smithy repository for rpbasicdesign.
rpcache
rpCache for rpTools
rpchemtools
Minimalist toolbox to deal with chemicals
rpcompletion
Mono-component reactions completion
rpextractsink
RetroPath2 sink generator
rpfba
Perform Flux Balance Analysis on a single or collection of SBML files containing heterologous pathways.
rplibs
Libraries for rpTools
rpreactor
A command-line and python package to handle biochemical reaction rules.
rpselenzyme
rptools
Suite of tools that work on rpSBML format
rptools-feedstock
A conda-smithy repository for rptools.
rpvisualiser
Metabolic engineering visualizer
rpviz
Visualize pathways from the RetroPath Suite
rr_cache
RetroRules Cache
rr_cache-feedstock
A conda-smithy repository for rr_cache.
rrparser
Reaction rules parser
rrparser-feedstock
A conda-smithy repository for rrparser.
rxn_rebuild
Rebuild full reaction from reaction rule
rxn_rebuild-feedstock
A conda-smithy repository for rxn_rebuild.
sbml2sbol-feedstock
A conda-smithy repository for sbml2sbol.
sbol-utilities
Command-line utilities and scripts for manipulating SBOL data
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