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btmartin721 avatar btmartin721 commented on June 15, 2024 1

Ok thanks for letting me know. Glad it helped. Also, I apologize for my delay in getting to this issue, but I'm glad it was resolved.

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btmartin721 avatar btmartin721 commented on June 15, 2024

Sorry for the potential bug. I'm not sure off the top of my head why it might be doing that. I'd need to test it with your phylip input file. If you want, you can send it to me privately [email protected], or you can upload it here.

-Bradley

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slvrshot avatar slvrshot commented on June 15, 2024

Sorry for the potential bug. I'm not sure off the top of my head why it might be doing that. I'd need to test it with your phylip input file. If you want, you can send it to me privately [email protected], or you can upload it here.

-Bradley

I sent that email! Thanks again!

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slvrshot avatar slvrshot commented on June 15, 2024

I think you can close this. I fed the script the output with gaps and it correctly counted the invariant sites. Thank you. This is a life saver.

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