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Name: Burcu Gürbüz
Type: User
Name: Burcu Gürbüz
Type: User
APMonitor Optimization Suite in MATLAB
Create a bifurcation diagram for a dynamic system.
Whole-heart electromechanical simulations using Latent Neural Ordinary Differential Equations
Chebfun: numerical computing with functions.
An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced features such as thermodynamic methods, extended Minimal Cut Sets, OptKnock, RobustKnock, OptCouple and more!
:world_map: A repository of CNApy projects
Numerical Continuation in MATLAB
COVID 19 Case Projection Model for Turkey
Data science for physicists
DDE-BIFTOOL is a set of routines for performing numerical bifurcation analysis of delay-differential equations, running in MATLAB or GNU Octave
Documentation for the DiffEq ecosystem
Multi-language suite for high-performance solvers of differential equations
A little script I have developed in MATLAB to perform dynamic sensitivity analysis on ODE models of biological systems. This sort of analysis can be useful to interpret changes in the system sensitivity to regulation and interventions at different simulated times. See link to a paper below that shows the insights that can be gained from performing this sort of analysis. See also the 'readme' file with useful/essential indications on how to use the script. Note that it involves creating a Simbiology model using the template provided within the script. A little example model is incorporated into the script where the user's model would be initially defined so that if you run the script as it is you should be able to see the kind of output it produces (for a small example model). https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4159174/
Evolutive Finite Elements for Diffusion Advection Reaction Problem
This folder contains matlab files for implementation of a Fractional Step Method for solutions of Advection-Diffusion-Reaction as described in Finite Difference Methods by Randall LeVeque
Finite volume toolbox for Matlab/Octave
Grid-based approximation of partial differential equations in Julia
A Julia package for hierarchically semi-separable (HSS) matrices.
Finite Element method for the 1D Advection-Diffusion-Reaction problem
A LaTeX-letter class for writing letters in the corporate design of the Johannes Gutenberg-University of Mainz
The Julia Programming Language
Approximate solutions of ODEs,PDEs and nonlinear equations
A community effort to review the state of modeling methodology in biology
Numerical Methods for Partial Differential Equations (MATH F422 - BITS Pilani)
Lecture material on numerical methods for partial differential equations.
A wrapper for the PyDSTool library
Simulation framework for nonsmooth dynamical systems
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.