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Callum Arthurs's Projects

chromogenj icon chromogenj

An example of a chromogen quantification macro for FIJI (imageJ)

labelstrip icon labelstrip

GUI wrapped around anonymise label for SVS and NDPI whole slide images

pomodoro icon pomodoro

A lightweight pomodoro timer for the mac terminal

prostsegnet icon prostsegnet

Keras unet and then chromogen analysis for prostate histopathology images.

qimage2ndarray icon qimage2ndarray

qimage2ndarray is a small python extension for quickly converting between QImages and numpy.ndarrays (in both directions).

quarray icon quarray

An application for exporting and analysing tissue array whole slide image files

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