Comments (1)
davek44
commented on September 25, 2024
This changed a bit between the tf1 and tf2 versions, and I know you're moving to tf2 from the other thread, so I'll hold off to give specific advice. Generally, num_targets in the parameters file is meant to help guide the model construction during training. I wrote the --ti option in basenji_test.py to allow me to write bigwigs for just a few of the many targets. So you can ignore it if you want to write all targets.
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Related Issues (20)
- No checkpoints found. HOT 3
- "When the bin size needs to be adjusted (e.g. from 128 to 100), how should I design the optimal pooling kernel size?" HOT 2
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- fasta file of saluki_predict_fasta.py HOT 1
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- failed running "basenji_sat_bed.py" in tutorials HOT 4
- Basenji Features used for Whole Blood Fine-Mapping HOT 3
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- question about clip threshold in basenji/enformer. HOT 2
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- pygene installation HOT 2
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- How to prepare TFRecords files for saluki training HOT 1
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