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Yi-An Tung's Projects

accuenhancer icon accuenhancer

Integrative analysis of enhancers from multiple cell types.

basset icon basset

Convolutional neural network analysis for predicting DNA sequence activity.

d-gex icon d-gex

Deep learning for gene expression inference

d3 icon d3

A JavaScript visualization library for HTML and SVG.

danq icon danq

A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences

deephaem icon deephaem

Implementation of a deep convolutional neuronal network for predicting chromatin features from DNA sequence

dependencywheel icon dependencywheel

A package dependency visualization using d3.js. Currently supports Composer for PHP.

factornet icon factornet

A deep learning package for predicting TF binding

grn-network icon grn-network

A d3pus visualization for Gene Regulatory Network from TRANSFAC®.

htsjdk icon htsjdk

A Java API for high-throughput sequencing data (HTS) formats.

patchimage icon patchimage

create an image of NewerSMB/Newer Specials from a (legal) dump of NSMB Wii

putelladatabase icon putelladatabase

A Putella gene database. Support searching by text and by sequence.

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