caozhichongchong Goto Github PK
Name: Anni Zhang
Type: User
Company: MIT, Alm Lab
Anni Zhang's Projects
ahr_finder
microbiota-derived indole/AhR-ligands pathway searching in sequencing data
alignment
annitator
arg_ranker
args-osp
Scripts supporting ARGs-OSP (args-osp.herokuapp.com)
bayerstraits_16s
bioinformatics_lecture
Lecture notes for bioinformatics analysis
buty_full
Infer phenotype by 16S: butyrate producing, nitrate reduction, sulfate reduction
buty_phyl
Infer phenotype by 16S: butyrate producing, nitrate reduction, sulfate reduction
coverage_calculator
covid_finder
COVID variants identification in sequence data
crispr_finder
crispr_finder
evo_decoder
i-vip
Integron Visualization and Identification Pipeline
keggmaster
meta_decoder
Decoding metagenomes: a reference-based metagenomics workflow
microbiomehd
Cross-disease comparison of case-control gut microbiome studies
network
R scripts for network construction
papp
Pan-genome and Pan-pathway Pipeline (PAPP)
phylo_pheno
mapping 16S to genotypes/functions in human gut microbiome
ptr_bn10
Peak to trough analysis for BN10 dataset
quickvariants
Fast and Accurate Variant Identification Tool for Sequencing-Based Studies
snp_finder
traits_finder
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