carrie-jw Goto Github PK

appian

APPIAN is an open-source automated software pipeline for analyzing PET images in conjunction with MRI. The goal of APPIAN is to make PET tracer kinetic data analysis easy for users with moderate computing skills and to facilitate reproducible research.

brainspace

BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics datasets | available in both Python and Matlab |

cbig

chinese-brain-pet-template

chinese-std-gb-t-7714-related-csl

GB/T 7714相关的csl以及Zotero使用技巧及教程。

clinica

Software platform for clinical neuroimaging studies

cmp

Connectome Mapper

complexheatmap

Make Complex Heatmaps

cowplot

cowplot: Streamlined Plot Theme and Plot Annotations for ggplot2

enigma

The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠

ggseg

Plotting tool for brain atlases, in ggplot

image-occlusion-enhanced

Anki add-on that transforms images into cloze tests

leaddbs

Lead-DBS is a MATLAB toolbox facilitating deep brain stimulation electrode localization and connectomic neuroimaging.

matplotlib

matplotlib: plotting with Python

mirror_symmetry

mricrogl

v1.2 GLSL volume rendering. Able to view NIfTI, DICOM, MGH, MHD, NRRD, AFNI format images.

mrilab

A Numerical Magnetic Resonance Imaging (MRI) Simulation Platform

multirat

A Rat fMRI multi-center study

myubantu

networkx

Network Analysis in Python

note_picture

note picture

ob_template

OB_Template is a vault template reference to be used on Obsidian.

openblas

OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.

papaya

A pure JavaScript medical research image viewer.

pysustain

Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.

quicklook

Bring macOS “Quick Look” feature to Windows

rabies

fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/en/stable/

slicerjupyter

Extension for 3D Slicer that allows the application to be used from Jupyter notebook

subcortex

tetrad

Repository for the Tetrad Project, www.phil.cmu.edu/tetrad.