Comments (1)
Solved, sorry for the dumb question (although the link is still broken).
> library(cbioportalR)
> Sys.setenv(CBIOPORTAL_TOKEN= "...")
> set_cbioportal_db(db = "msk")
from cbioportal.
Related Issues (20)
- Refinements to the Jupyter modal HOT 1
- PCAWG does not show the usual charts first on Study View by default
- Too many dots in categorical bar charts
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- Migration guide doesn't mention renaming of db properties
- Parsing of application.properties fails HOT 1
- Context path change error
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- group comparison page crashes when re-selecting a group
- in oncoprint show expression heatmap by default if no genomic data available
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- for the files&link tab on patient view show sample id column
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- Add custom data datatype option in plots tab HOT 1
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- cosmic links to different mutation at same position
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- In MSK data, some condition causes sample-list-counts to fail HOT 1
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from cbioportal.