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alphafold

Open source code for AlphaFold.

amber

The Abundance Matching Box for the Epoch of Reionization (AMBER) is a semi-numerical code for modeling the cosmic dawn and reionization.

apex

A PyTorch Extension: Tools for easy mixed precision and distributed training in Pytorch

arcs

🌈Scaffold genome sequence assemblies using linked or long read sequencing data

atram

audio

simple audio I/O for pytorch

bash-snippets

A collection of small bash scripts for heavy terminal users

bcftools

This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

bitsandbytes

8-bit CUDA functions for PyTorch

blobtools

Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets

chiron

A basecaller for Oxford Nanopore Technologies' sequencers

cinnamon-i3

i3 as window manager for cinnamon sessions

colossalai

Making large AI models cheaper, faster and more accessible

comparative-annotation-toolkit

cpython

The Python programming language

cq-intro-python

Calcul Québec training : Introduction to Programming with Python - PYT101

cudf

cuDF - GPU DataFrame Library

cvtkpy

A Python package for calculating temporal covariance.

dedalus

A flexible framework for solving PDEs with modern spectral methods.

deepspeed-mii

MII makes low-latency and high-throughput inference possible, powered by DeepSpeed.

dfasd

dlib

A toolkit for making real world machine learning and data analysis applications in C++

easybuild-easyconfigs

A collection of easyconfig files that describe which software to build using which build options with EasyBuild.

easybuild-framework

EasyBuild is a software installation framework in Python that allows you to install software in a structured and robust way.