chuan-wang Goto Github PK
Name: Chuan Wang
Type: User
Company: National Genomics Infrastructure, Science for Life Laboratory
Bio: Bioinformatician at NGI, SciLifeLab in Stockholm
Location: Stockholm
Name: Chuan Wang
Type: User
Company: National Genomics Infrastructure, Science for Life Laboratory
Bio: Bioinformatician at NGI, SciLifeLab in Stockholm
Location: Stockholm
VWorks protocols and other files for the Agilent NGS Workstations at the Genomics facility at SciLifeLab.
Database for IGN projects and samples, with RESTful interface. Built on top of Tornado and CouchDB.
Nextflow frequently asked questions
Collection of python scripts to parse Illumina (demux with bcl2fastq v2.17+) output
Python interface to the GenoLogics LIMS server via its REST API.
Python interface for the Genologics Postgres database.
Tornado server for tracking samples at NGI Stockholm
The Environmental Genomic Group also does lab work. This is how we do it.
Aggregate results from bioinformatics analyses across many samples into a single report.
Test data for MultiQC. See https://github.com/ewels/MultiQC
Nextflow ChIP-seq data analysis pipeline, National Genomics Infrastructure, Science for Life Laboratory in Stockholm
Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.
Nextflow Small RNA Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.
Code driving the production pipeline at SciLifeLab
Code to generate reports for use by the NGI in SciLifeLab
For converting Illumina Samplesheet that contains Chromium 10X indexes
A collection of Genologics Clarity LIMS EPPs used at Scilifelab.
Repository to store standalone scripts that do not belong to any bigger package or repository
Python wrappers and methods to work with CouchDB's instance at NGI Stockholm
Tool for the Automation of Cleanup and Analyses
A TACA plugin adding functionality relevant for the ngi_pipeline
Test data to be used for automated testing with the nf-core pipelines
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.