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3duf

Interactive microfluidic design editor

3duf-paper-designs

Designs used in the 3DuF paper

3duf-server

3duf-web-plugin

A simple javascript plugin that will allow you to open your design on 3DuF

alphaphoenix

Modeling Synthetic Genetic Systems with Temporal Logic

alphaphoenix-gui

GUI for Phoenix

badgeapi

This is the project!

badgeclient

bdaeugene

biocps-synthesis

Code base to Synthesize Genetic Circuits characterized and specified using Signal Temporal Logic

bioelectronics

bocs

Base Repo for BOCS

cc

Control Interface that uses a 3DuF visualization engine

cc-old

cello

Genetic circuit design automation

cello-ucf

UCFs, input sensor files, output device files, and JSON Schemas for Cello.

cello-ucf-visualize

cello-v2

Cello v2 is the continuation of the Cello genetic circuit design software.

cello-v2-1-core

Streamlined Cello Algorithm. Feed it Verilog and UCF from CIDARLAB/CELLO-UCF, and run celloAlgo.py in terminal to make genetic circuit designs locally on your machine.

cello-v2-dsgrn

A Cello-v2 application supporting gate assignment for a DSGRN network.

cello-v2-webapp

This is a webapp designed to support the Cello v2 genetic circuit design software.

cello-v2-webapp-gui

This is the source for the GUI that supports the Cello v2 webapp. This repository exists only for development purposes. If you want to use the GUI, either visit http://cellocad.org to interact with a running instance, or https://github.com/CIDARLAB/Cello-v2-webapp for instructions on running a Docker image or building the webapp from source.

celloadapter

A Java Client Library interfacing between Fluigi and Cello

celloapi2

Python API for interfacing with Cello2

celloucf2sbol

API to convert Cello UCF to SBOL

celltraptemp

cidar-ice

Customizations of JBEI's ICE Registry

cidarlab.github.com

CidarLab Repository Information

citationsapi

clotho-client-command