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aautosig

Autoencoder for mutational signature extraction

ccostr

An R package, ccostr, which calculates estimates of mean cost given censored data

cdx

Code for the CDx book chapter

cluster5

doser

R package for Dose Response experiments

dream_beat_aml

eqvalue

hemaclass

Classification tools for haematological diseases

hemaclass-paper

Paper for the hemaClass package/website

loamr

Limits of agreement with the mean - R

misclass

R code and output for unsupervised clustering misclassification project

pronco-django-admin-views

PCM-version of the third party django package django-admin-views

pronco-django-db-locking

PCM-version of the third party django package django-db-locking.

sigprofilerextractor

SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities in each sample, and the probability for each signature to cause a specific mutation type in a cancer sample. The tool makes use of SigProfilerMatrixGenerator and SigProfilerPlotting.

simex

:exclamation: This is a read-only mirror of the CRAN R package repository. simex — SIMEX- And MCSIMEX-Algorithm for Measurement Error Models. Homepage: https://github.com/wolfganglederer/simex Report bugs for this package: https://github.com/wolfganglederer/simex/issues

simex-1

The simex Package -- This pakage for R implements the simex procedure developed by Cook & Stefanski for dealing with measurement error models, as well as the mcsimex for misclassified data developed by Küchenhoff, Mwalili and Lesaffre.

simplebiostats

Simple Biostatistics in Python