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canaline

Match boxes to text.

cannyfs

A shim file system giving excellent throughput by assuming all I/O operations CAN complete successfully.

cnf2freq

Compute haplotype and genotype probabilities, and perform imputation, in arbitrary pedigrees, including cases under possible observational errors.

containers

Containers for use on Singularity Hub

cxic9714-analysis

demorepo

Demo for workshop.

genocae

Convolutional autoencoder for genotype data

grafana

Gorgeous metric viz, dashboards & editors for Graphite, InfluxDB & OpenTSDB

h5py

HDF5 for Python -- The h5py package is a Pythonic interface to the HDF5 binary data format.

htslib

C library for high-throughput sequencing data formats

hummingbird

Monitoring and Analysing flash X-ray imaging experiments

jackdaw

Tools for handling phase retrieval and related tasks in sparse (low-signal) X-ray single particle imaging applications, specifically COACS.

libfuse

The reference implementation of the Linux FUSE (Filesystem in Userspace) interface

samtools

Tools (written in C using htslib) for manipulating next-generation sequencing data

shapeit4

Segmented HAPlotype Estimation and Imputation Tool

shocksolution_examples

Example code from shocksolution.com

slurm

Slurm: A Highly Scalable Workload Manager

snmp-fetch

An opinionated python3.7 SNMPv2 package designed for rapid database ingestion.

uuadvstatcomp

Course Materials for R course

workshop-neural-nets-and-deep-learning

NBIS workshop in Neural Nets and Deep Learning