Related Issues (20)
- In DNA methylation tutorial, the data for matrices construction and secondary processing are not consistant. HOT 1
- 'IndexError: list index out of range' when running epi.tl.geneactivity() HOT 3
- numpy>=1.21.2 requires python >= 3.7 but install docs show python 3.6
- Error with normalize_total() HOT 2
- How to generate count matrix in Episcanpy
- Potential edit required in building count matrix (methylation) HOT 1
- Plans to include other QC parameters for scATAC-seq data?
- episcanpy.tl.silhouette calls sklearn.metrics.silhouette_score with wrong arguments HOT 1
- Error in Generating Methylation Count Matrices HOT 2
- Questions about running time for epi.tl.geneactivity
- installation should say python 3.7 else SyntaxError: future feature annotations is not defined
- Type in import of `tss_enrichment_score` HOT 1
- Import Error when Importing on Python 3.9
- Do we have method which can find tf-gene or peak-gene relation? HOT 1
- Problems in importing the api after PyPI installation HOT 2
- Bug in silhouette score calculation
- Installation on Mac M2 HOT 1
- epi.ct.bld_mtx_bed drops information from certain threads
- Issue with `epi.pp.pca` : Unexpected Argument Error
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