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alf

alf2neuroscope

Converts ALF format to be read in neuroscope

allenccf

Tools to work with Allen Inst CCF data in matlab

alyx

Database for experimental neuroscience laboratories

alyx-client

alyx-matlab

Some MATLAB functions for easier interfacing with an Alyx database

alyx-registrator

archiving

Scripts and miscellaneous tools for dealing with archiving and restoring data to/from tape

expdefinitions

experiment definition files (primarily Signals)

groundtruth

first commit

ibl-meeting-alyx-presentation

kilosort

GPU code for spike sorting

kilotroderig

code specific to the kilotrode rig

labci

Automation server for MATLAB & Python continuous integration, written in Node.js

lilrig

code specific to Lilrig

matlab-tools

A collection of useful MATLAB libraries

mmmgui

"mouse movie manager" and GUI

mpep

mPEP runs experiments where stimuli and timings can be decided in advance (i.e. not in the context of behavior)

neuropixels

Information about Neuropixels electrode arrays

npy_matlab

Experimental code to read/write NumPy .NPY files in MATLAB

npytools

[WIP] Command-line utilities to deal with NPY array files

phy

phy: interactive visualization and manual spike sorting of large-scale ephys data

phy-plugins

phylib

Lightweight electrophysiological data analysis library

pinkrigs

Shared code for processing data on the pink rigs

poppyrig

Code for poppy rig

psychofit

A module for fitting 2AFC psychometric data

pykilosort

[WIP] Python port of Kilosort 2

rigbox

A MATLAB toolbox for running behavioral neuroscience experiments and managing data

rigconfig

configuration files for rigs