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analyzingneuraltimeseries

Code for ANTS book (Cohen, 2012, MIT Press)

bfast3d

BFAST3D: Bayesian Fast Accurate Spatial Tricks in 3D. For fMRI analysis.

bids-brain_tumours

template specification for brain tumour imaging using BIDS

bids-examples

A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.

bids-extensions

BIDS Extension Proposal Docs

bids-matlab

MATLAB / Octave tools for BIDS datasets

bids-specification

Brain Imaging Data Structure (BIDS) Specification

bids-starter-kit

Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets

bids-website

Website for the Brain Imaging Data Structure standard.

book

Sources for the DataLad handbook

brain_colours

colour map for brain imaging

canlabcore

Core tools required for running Canlab Matlab toolboxes.

cpernet.github.io

personal website: https://cpernet.github.io/

dvars

Insight & Inference for DVARS: 3-part variance decomposition, gives units & p-values to DVARS measures as well as spatiotemporal rs-fMRI diagnostic.

eeg_facedata_wakeman-henson

EEG only analyses from Wakeman & Henson Face Data

eegpreprocessing_not_so_basic

OHBM 2020 Educational

fmri_glm_testing

fs-docker

Dockerfiles for FreeSurfer

git-workshop

Repository accompanying the workshop "Collaborative version control with Git/Github"

heart_failure

hmm-mar

Toolbox for segmentation and characterisation of transient connectivity

languagedecision

Repo for the analysis of a language related task in healthy participants and stroke patients

matlab-api

Convert MATLAB figures to online plotly graphs with a single line of code.

matlab-bayesian-estimation

Matlab Toolbox for Bayesian Estimation

matlab_checkcode

meta_meditation

raw metadata files, scripts and derived files for 'Mindfulness related changes in grey matter: A Systematic Review and Meta-analysis'

mffmatlabio

MFF Matlab file importer and exporter

mindy

The up-to-date code for Mesoscale Individualized NeuroDynamic modeling and filtering

mml-book.github.io

Companion webpage to the book "Mathematics For Machine Learning"

moxunit

An xUnit framework for Matlab and GNU Octave