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2022-sourmash-uniqify

Greedy iterative clustering of genomes using sourmash

advanced-swc

Intermediate and Advanced Software Carpentry tutorial material

advanced_iplant

Materials and scripts for the API-focused "Advanced iPlant" workshop series

anvio

An analysis and visualization platform for 'omics data

assembly-exercise

Shotgun sequencing of text, in CGI script form

astrobiomike.github.io

Site to help biologists wade their way into bioinformatics.

async-team

Documentation about how to run an async team (e.g. a remote team in different places)

atlas

ATLAS - Three commands to start analysing your metagenome data

bags

Bacterial genomics with pygr

bcalm

de Bruijn graph compaction in low memory

beacon

BEACON course

bears_analyses

Examples of kallisto + sleuth

bedtools2

bedtools - the swiss army knife for genome arithmetic

besss

Better Science Through Superior Software

best-practices-scientific-computing

Source for paper on best practices in scientific computing

binder-uw-topmed

Try to get a binder running for topmed workshop at UW (2018)

binderhub

Deterministically build docker images from a git repository + commit

biobombe

BioBombe: Sequentially compressed gene expression features enhances biological signatures

bioboxes.org

The website for bioboxes

bioconda-recipes

Conda recipes for the bioconda channel.

bioconda.github.io

Bioconda is a distribution of bioinformatics software realized as a channel for the versatile package manager Conda.

bioinformatics

Tools for bioinformatics

biolib

Python package for common tasks in bioinformatic.

blastkit

bloomtree

bodegabayworkshop

Files for phylogeny workshop

boink

bslaby-scripts

A collection of free-to-use scripts

caper

Fast short read alignment database

cats-in-practice-public