Name: Fabio Cumbo
Type: User
Company: Center for Computational Life Sciences, Lerner Research Institute, Cleveland Clinic
Bio: Ph.D. in Computer Science and Automation Engineering, Postdoctoral Researcher @BlankenbergLab, CCLS, LRI, Cleveland Clinic Foundation, USA
Twitter: cumbofabio
Location: Cleveland, OH, USA
Blog: https://cumbof.github.io/
Fabio Cumbo's Projects
Test your algorithmic binary options trading strategy on financial market data from Yahoo Finance
Conda recipes for the bioconda channel.
A Python tool for the analysis of biological pathways with machine learning techniques
BTC wallets discovery - test your luck
Domain-Agnostic Supervised Learning with Hyperdimensional Computing
Final Project for Computational Graphics course
Personal Web Page
Data intensive science for everyone.
Chrome extension that automatically scrape and send data from a webpage to the current history of a Galaxy instance.
Galaxy tool wrappers
Hyperdimensional Computing Library for building Vector Symbolic Architectures in Python 3
A novel method for assessing and measuring homophily in networks
Flask webserver for rendering igv.js
Example project for integrating igv.js and flask
Points of interest analyzer for Instagram
a toolkit for evaluation of the lenght of k-mer in a given genome dataset for alignment-free phylogenimic analysis.
A scalable framework for automatically indexing microbial genomes and accurately characterizing metagenome-assembled genomes with Sequence Bloom Trees
MetaSBT public databases
A Python package for extracting minimizers from sequence data
A open-source framework for organising multi-omics data from heterogeneous data sources
An open-source Java tool to automatically extract and convert all clinical and genomic data from the Genomic Data Commons to BED, GTF, CSV, and JSON format
Python implementation of the OpenGDC software https://github.com/cumbof/OpenGDC
Python tool to interact with the public RNAcentral APIs and automatically retrieve data
Spark standalone cluster on Docker
Relaxing DB queries through domain taxonomies
The Cancer Genome Atlas Data Extraction and Conversion Tool
Tool Shed repositories maintained by the Intergalactic Utilities Commission