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Curro Campuzano's Projects

balcony icon balcony

R package: BALCONY (Better ALignment CONsensus analYsis)

big-scape icon big-scape

Similarity networks of biosynthetic gene clusters

biotools_hqc icon biotools_hqc

Activity notebook on the Human glutaminyl cyclase (hQC) protein using the lazarus development environment for the Protein Engineering course 2021-2022.

birc-thyme icon birc-thyme

A chromosome-level assembly of Thymus vulgaris using Homology-Based scaffolding

comw icon comw

Comparative Metatranscriptomics Workflow

cpvo_register icon cpvo_register

Web Scrapper for the CVPO (Community Plant Variety Office) for surveillance of intelectual property of plant varieties.

demografr icon demografr

Fast and simple simulation-based population genetic inference in R

hmmerutils icon hmmerutils

A bunch of convenient functions to search for homologous sequences using the HMMER API, annotate them taxonomically, calculate physicochemical properties and facilitate exploratory analysis of homologous sequence data.

kmerbloomfilter icon kmerbloomfilter

A script to extract all kmers appearing more than once using a Bloom Filter.

nanoclust icon nanoclust

NanoCLUST is an analysis pipeline for UMAP-based classification of amplicon-based full-length 16S rRNA nanopore reads

slim icon slim

SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexible, with a built-in scripting language, and has a cross-platform graphical modeling environment called SLiMgui.

speedytree icon speedytree

Canonical and RapidNJ implementations of Neighbor-joining in Rust

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