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Yu-Lin's Projects

aide icon aide

AIDE: Annotation-efficient deep learning for automatic medical image segmentation

airtoolsii icon airtoolsii

The AIR Tools II toolbox for MATLAB accompanies the publication "AIR Tools II: algebraic iterative reconstruction methods, improved implementation", Hansen, P. C. & Jørgensen, J. S. Numer Algor (2017).

convolt icon convolt

CONVOLT: CONVolutional Operator Learning Toolbox (for Matlab)

dltk icon dltk

Deep Learning Toolkit for Medical Image Analysis

gate icon gate

Official public repository of Gate

genfire-matlab icon genfire-matlab

MATLAB implementation of GENFIRE (GENeralized Fourier Iterative REconstruction) for 3D image reconstruction from arbitrarily oriented 2D projection images

horus icon horus

3D Scanning multiplatform desktop application

image-processing-filter icon image-processing-filter

This project add filters to any image you upload Filters: Average - Gaussian - Median - Adjust - Complement - Add - Divide - Multiply - Sobel - Prewitt - Histogram - Laplacian

irtools icon irtools

MATLAB package of iterative regularization methods and large-scale test problems. This software is described in the paper "IR Tools: A MATLAB Package of Iterative Regularization Methods and Large-Scale Test Problems" that will be published in Numerical Algorithms, 2018.

mri-scan-segmentation icon mri-scan-segmentation

Sem 8 Project: Multi Level Segmentation of MRI scans - Cuckoo Search; FCM with Ant Colony Optimisation

oda-cts icon oda-cts

Oral and Dentition Anatomy-based Cross-junction (Soft) Tissue Segmentation Algorithm for Cone-Beam Computed Tomography Dental Diagnostics

openplan icon openplan

openPlan is a comprehensive solution for object linking and medical imaging visualization between Blender and 3D Slicer.

phantast-matlab icon phantast-matlab

Repository for the MATLAB implementation of the phase contrast microscopy segmentation toolbox (PHANTAST)

platemo icon platemo

Evolutionary multi-objective optimization platform

rtk icon rtk

Reconstruction Toolkit

sera icon sera

Standardized Environment for Radiomics Analysis

t2n icon t2n

T2N is an extension of the TREES toolbox providing an interface between Matlab and the compartmental modeling environment NEURON. It was published in (and should be cited this way): Beining M, Mongiat, LA, Schwarzacher SW, Cuntz H, Jedlicka P: T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born dentate granule cells. eLife 2017; 6:e26517

tigre icon tigre

TIGRE: Tomographic Iterative GPU-based Reconstruction Toolbox

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