Comments (3)
Quick update: I somehow had missed your documentation of the COMMIT_Debugger, sorry about that. However, my problem persists, even on your Lausanne data (for the Debugger).
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Hello Martin,
did you run the demo on the Lausanne data? Do you have problem on the "Exporting EC compartments" also there?
The COMMIT Debugger is not a tool to debug the code but is a tool where you can visualize your data, check orientations of the peaks and other useful informations about your data.
You can e-mail me your data.
Muhamed
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Thanks for the reply - yes I did run the whole demo correctly. And of course I understood that the Debugger was for data debugging, but still it would be nice to validate my data.
I'll go ahead and upload my data then, thanks!
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Related Issues (20)
- Extend get_coeffs to extract coefficients of original/preconditioned problem HOT 1
- Improve precision of values stored in file `streamline_weights.txt` HOT 1
- Peaks file requirement for COMMIT2 HOT 3
- Numpy version incompatability? HOT 2
- [fix] tckedit command in Wiki is too long HOT 3
- COMMIT2 on QSIPrep/QSIRecon Outputs HOT 14
- It takes too long to fit model. HOT 20
- From what I see there is no difference between outputs of COMMIT1 and COMMIT2 HOT 18
- Unlike yours, the number of tracks in my tck file decreased HOT 2
- trk2dictionary not working with spyder HOT 2
- Final Output from COMMIT2 Not Aligned HOT 9
- Index is out of bounds for axis 0 in iFOD2 algorithms. HOT 6
- "Inhomogeneous shape error" with Numpy version 1.24.0 HOT 2
- Building operator A error: no EC compartments HOT 4
- Operator is not recompiled when parameters change
- Errors in COMMIT2 tutorial HOT 5
- Add integration with Travis CI HOT 1
- Improve progress bar in Jupyter notebook/labs HOT 1
- see an error in trk2dictionary HOT 7
- How to obtain a file like demo01_fibers_connection.tck when the tractogram and the number of gray-matter ROIs are huge. HOT 4
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