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Replica Exchange Analysis
Reveal protein energy centers.
Statistical Mechanics Lecture Notes (Chem563 for Spring 2019)
Creative Machine Learning course and notebook tutorials in JAX, PyTorch and Numpy
computational biology tools
Automated omics-scale protein modeling and simulation setup.
A comprehensive toolkit for predicting free energies
Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation
Dockerfile for Gromacs wih GPU support and PLUMED plugin.
Collection of example scripts for running and analyzing molecular dynamics
MDAnalysis is a Python library to analyze molecular dynamics simulations.
Functions for lab-specific molecular dynamics analysis.
An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM
A batteries-included toolkit for the GPU-accelerated OpenMM molecular simulation engine.
Calculating paramagnetic NMR effects in proteins
Parameter/topology editor and molecular simulator
Implementation of Protein Dynamically Activated Residues (ProDAR) for dyamics-informed protein function prediction/annotation
Predicting protein structure through sequence modeling
Chemical Shift Covariance Analysis with Python
Some Rosetta Scripts that allow for various simple tasks
Seq2Ensemble: Collection of Colab based notebooks for facilitating conformational ensemble generation
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.