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alphashape

Toolbox for constructing alpha shapes.

arachnid

Image analysis software for cryo-electron microscopy

arduino

Uncurated collection of my Arduino codes. Don't trust anything in here.

biopython

Official git repository for Biopython (converted from CVS)

ceygen

Cython helper for linear algebra with typed memoryviews built atop of Eigen C++ library

contact-vis

Python package for simple protein residue-residue contact map plotting.

cyto-challenge

dummy

dummy Python package, for testing purposes

einsteniangema

Automatically exported from code.google.com/p/einsteniangema

fast-pycwt

Fast implementation of some Continuous Wavelet Transforms.

gaussdca.jl

Multivariate Gaussian Direct Coupling Analysis for residue contact prediction in protein families - Julia module

gpy

Gaussian processes framework in python

iminuit

Interactive Minimization Tools based on Minuit

install-opencv-jetson-nano

OpenCV installation script with CUDA and cuDNN support

inviwo

Inviwo - Interactive Visualization Workshop

keras

Deep Learning library for Python. Convnets, recurrent neural networks, and more. Runs on Theano and TensorFlow.

keras-cv

Industry-strength Computer Vision workflows with Keras

keras-io

Keras documentation, hosted live at keras.io

ml-playground

mplutils

A library that includes some useful functionality to work with matplotlib

ng-numpy-randomstate

Numpy-compatible random number generator that supports multiple core psuedo RNGs and explicitly parallel generation.

notebook

Collection of jupyter notebooks for demonstrating software.

numexpr

Fast numerical array expression evaluator for Python and NumPy

numpy

Numpy main repository

numpy-100

100 numpy exercises (80/100 actually)

ocropy

Python-based tools for document analysis and OCR

optizelle

Optizelle [op-tuh-zel] is an open source software library designed to solve general purpose nonlinear optimization problems.

pcons-fold

A pipeline for protein folding using predicted contacts from PconsC and a Rosetta folding protocol.

percolator

Semi-supervised learning for peptide identification from shotgun proteomics datasets