Related Issues (20)
- Questions about model weights
- Sampling temperature for flexible chains
- what pdbx package does parse_cif_noX.py expect? HOT 2
- Global_score
- No use of GPU?
- jsonl file to pdb
- --omit_AA "CM" parameter?
- How to confirm the global polar amino acid bias value? What is the meaning of 1.39?
- No chain_set_test.jsonl file in the root directory
- Design complexes with unknown chains (proposed fix included)
- Amino acid sequence has too many "K/E" HOT 2
- How do I use a PSSM with proteinMPNN?
- Need of assistance and advising
- Model is adding an amino acid to the original sequence HOT 5
- Creates hydrophobic surface patches wit many Ala side chains HOT 2
- Training time HOT 1
- What is the difference between --conditional_probs_only_backbone and --unconditional_probs_only HOT 1
- Empty parsed_pdbs.jsonl file from parse_multiple_chains.py helper script? HOT 1
- RuntimeError: Class values must be smaller than num_classes. | protein_mpnn_utils.py & mask_size issue?
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