Related Issues (20)
- Add statistics about filtered sequences to output
- Add alignment summary: organisms HOT 1
- Add 2ndary structure pred. from ECs
- Unable to download the database files using evcouplings_dbupdate HOT 2
- Unable to perform the de novo protein structure prediction. HOT 2
- Possible error in complex mixture model scoring HOT 1
- Non-alphabet characters aren't counted as gaps when computing sequence coverage
- Low quality mutational landscape HOT 1
- Code for running jackhmmer to produce MSA, and postprocess to get A2M.file HOT 1
- Running EVComplex with own database
- lack of explicit separator in read_csv in /mutate/protocol.py HOT 3
- Incompatible .model file from EVCouplings web server HOT 4
- Is hhfilter necessary? HOT 2
- EVcouplings not compatible with Python 3.10 version HOT 3
- Incorporate hhpred for pdb search in compare stage
- Evcouplings_dbupdate ResourceError HOT 5
- Troubleshooting Help HOT 2
- EVmutation vs DeepSequence HOT 1
- Feat request: Alphafold within EVCouplings HOT 3
- KeyError: 'samples' using complex pipeline HOT 3
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