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pdl avatar pdl commented on June 8, 2024

Is it possible to use pyensembl local database with Genoverse?

I see no reason why this couldn't work. You would need to write a server, presumably in python if that's what you're using for database access, to expose via HTTP the data you want to visualise in Genoverse. You'd essentially be duplicating what the ensembl web service itself does - as project it should not be technically very challenging but it would be a lot of work, and it may be easiest to start by using the Ensembl REST APIs, unless you have particular reasons for managing your own copy of this data.

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