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bash_advanced_development

development repo for the bash advanced course

bio-cwl-tools

CWL CommandLineTool descriptions for biology/life-sciences related applications

biobb-cwl-tutorial

test cwl code

biobb-cwl-tutorial-http

tutorial code test, for using http rather than local files

biobb-wf-md-setup-protein-cwl

biobb_hpc_cwl_md_list

CWL HPC Workflows for BioExcel

biobb_wf_cwl_tutorial

bioconda-recipes

Conda recipes for the bioconda channel.

bng_latlon

Converts british national grid (OSBG36) to lat lon (WGS84) and vice versa.

build-instructions

Contains build scripts and instructions for software on a variety of UK HPC resources

cf-python-feedstock

A conda-smithy repository for cf-python.

checklist_checkamundo

cw22_cwl_novice_exercises

CWL Novice Exercises for the Collaborations Workshop 2022

cwl-intermediate-tutorial

cwl-mutation-example

cwl-novice-tutorial

Introduction to Workflows with Common Workflow Language

cwl-tutorial-material-prototype

Prototype code for CWL Novice tutorial

cwl-utils

Python 3.6+ utilities for CWL

cwltool

Common Workflow Language reference implementation

cylc

Cylc, a workflow engine for cyclical systems.

cylc-doc

Documentation (User Guide, Cheat Sheets, etc.) for the Cylc Workflow Engine.

datascience

Files from our session(s) on Data Science

diffrl

docker-wagtail

Simple starting point for wagtail with docker

dsmacc

Dynamically Simple Model of Atmospheric Chemical Complexity

emep_operational_scripts

Collection of scripts, and namelists, for running EMEP (and WRF) on CSF3

emiss_mexico

Model system for convert annual emissions to WRF-chem ready emissions.

f2py-manic-demo

Testing the construction of Python modules from complex Fortran model code.

gromacs-docker

Dockerfile for GROMACS

gromacs-feedstock

A conda-smithy repository for gromacs.