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admin-requests

answers

Random code produced to answer questions on biostars/seqanswers/etc.

autowrap-feedstock

A conda-smithy repository for autowrap.

bamhash

bbmeth

BBMeth: An R package for fitting methylation data with a beta-binomial model

bhsw_covid_incidence

Covid-19 incidence per week by community in Breisgau-Hochschwarzwald

bioawk

BWK awk modified for biological data

bioblend

A Python library for interacting with CloudMan and Galaxy API

bioconda-recipes

Conda recipes for the bioconda channel.

bioconda-utils

Utilities for building and managing bioconda recipes

bioconda_bioconductor_interface

This is a repository for me to conveniently track and share issues with bioconductor packages on bioconda

biostar-central

BiosStar Q&A

biostar-mod-templates

Moderator Templates for https://www.biostars.org/

bison

Bisulfite alignment on nodes of a cluster

bison_tutorial

A tutorial for the Bison package

booster

bwa

Burrow-Wheeler Aligner for pairwise alignment between DNA sequences

bwa-meth

align BS-Seq reads and extract methylation without intermediate temp files

cdna_cupcake

Miscellaneous collection of Python and R scripts for processing Iso-Seq data

chromosomemappings

This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.

clair3

Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

commonmark-feedstock

A conda-smithy repository for commonmark.

conda-build

Commands and tools for building conda packages

conda-forge-pinning-feedstock

A conda-smithy repository for conda-forge-pinning.

conduit

CONDUIT - CONsensus Decomposition Utility In Transcriptome-assembly

corset

Software for clustering de novo assembled transcripts and counting overlapping reads

countrepeats

Count (whole genome) alignments that happen to map to repeats. This allows multimappers to multiple repeats.

cutadapt

cutadapt removes adapter sequences from sequencing reads

densityclust

Clustering by fast search and find of density peaks

docker-miso

MISO from TGAC in a Docker container